used_markers

returns a vector of markers for given input_type and data slot.

Usage

used_markers(fcd, input_type, prefix = NULL, data_slot, mute = F)

Arguments

fcd

flow cytometry dataset.

input_type

Data for marker extraction, e.g. "pca", "umap", "phenograph", "FlowSOM"

prefix

Optional prefix of the specific data_slot, if used.

data_slot

Data slot for marker extraction, e.g. "orig" or "norm".

mute

LOGICAL, if output of function is wanted (F) or not (T). Default = F.

Value

The function returns a vector containing the markers used for the specified method.

Details

used_markers